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Sukhdeep Singh

Bioinformatician

Biotechnologisches Zentrum, Dresden, Germany

Work History

  • 2011

    Biotec TU Dresden

    Predoctoral Student.

    July 2011 – Present | Dresden, Germany

    I am a pre-doctoral student and a bio-informatician by background working with high-throughput transcriptomic and regulomic (ChIP-Seq,RNA-SEQ) data to understand the interplay of histone methylases and demethylases in the mouse embryonic stem cell development. Our lab (Francis Stewart) is a core epigenetics lab and I support the bioinformatics component of the de-centralized experimental network of the SYBOSS project. http://www.syboss.eu/

  • 2011

    SYBOSS Project Systems Biology of Stem Cells and Reprogramming.

    Bioinformatician.

    July 2011 – Present | Dresden, Germany

    Creating ChIP-Seq and RNA-Seq computational pipelines for handling and analysis of data-sets generated within project from home and the partner labs. The aim of the project is to understand how a simple stem cell becomes a highly specialized member of a network, and how those conditions could be recreated in treating disease.

  • 2013

    Biostars.org

    Editor

    January 2013 – Present | Worldwide

    My duties include : - monitoring spam and other content - answering, editing and reformatting the posts - closing duplicate, less informative and non-related posts

Education History

  • 2009

    University of Leicester

    MSc in Bioinformatics (Merit) , Software Engineering

    (2009 - 2010)

    Thesis - Structured Spreadsheet Web Interface for Neurophysiology Data Analysis. A web-application was developed for a functional reactive programming language (Bugpan) for experimenting on dynamic systems.

Programming Skills

  • ChIP-Seq
    100%
  • RNA-Seq
    90%
  • R
    90%
  • Bash/Shell
    60%

Language Skills

  • ConversationalGerman
  • ProfessionalEnglish
  • NativeHindi/Punjabi

Location